Rapid sequence-independent cellular response to oligodeoxynucleotides

Cloning of random-sequence oligodeoxynucleotides.

Methods are described for cloning random or highly degenerate nucleotide (nt) sequences. The procedures use synthetically derived mixtures of oligodeoxynucleotides (oligos) whose heterogeneous central portions are bounded at their 5' and 3' ends by sequences recognized by restriction endonucleases. Oligo collections of defined length and nt composition are synthesized by utilizing appropriate c...

Cellular response to ionizing radiation: A microRNA story

MicroRNAs (miRNAs) represent a class of small non-coding RNA molecules that regulate gene expression at the post-transcriptional level. They play a crucial role in diverse cellular pathways. Ionizing radiation (IR) is one of the most important treatment protocols for patients that suffer from cancer and affects directly or indirectly cellular integration. Recently it has been discovered that mi...

Rapid response of rice plants to arsenite toxicity

Absorption of arsenic (As) by plant root is an essential activity that bridges the soil As concentration and physiological responses which can be monitored soon after exposure to As. In the present study, physiological responses to short exposure to arsenite (AsIII) was compared in two indigenous rice cultivars one adapted to temperate and humid (TH) and the second one to warm and humid (WH) cl...

The roles of EPIYA sequence to perturb the cellular signaling pathways and cancer risk

Abstract It was shown that several pathogenic bacterial effector proteins contain the Glu-Pro-Ile-Tyr-Ala (EPIYA) or a similar sequence. These bacterial EPIYA effectors are delivered into host cell via type III or IV secretion system, where they undergo tyrosine phosphorylation at the EPIYA sequences, which triggers interaction with multiple host cell SH2 domain-containing proteins and thereby...

TLR-Dependent and -Independent Induction CpG-B Oligodeoxynucleotides Inhibit